Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm12217-201ENSMUST00000118858 696 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm14208-201ENSMUST00000119645 678 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm18753-201ENSMUST00000201000 566 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm17812-201ENSMUST00000204935 318 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Nsd1-205ENSMUST00000224693 852 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gm5616-201ENSMUST00000165252 384 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gm17040-202ENSMUST00000170597 889 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gm8741-201ENSMUST00000174736 384 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Gm45224-201ENSMUST00000208203 414 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-2P97503 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.44□□□□□ -0.58
Nkx3-2P97503 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms