Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm12990-201ENSMUST00000120372 468 ntBASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm8737-201ENSMUST00000122208 642 ntBASIC11.16□□□□□ -0.62
Cacna1aP97445 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm9136-201ENSMUST00000193368 454 ntBASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm29808-201ENSMUST00000194419 468 ntBASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cacna1aP97445 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.15□□□□□ -0.62
Cacna1aP97445 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm16071-201ENSMUST00000119589 793 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm11836-201ENSMUST00000121022 441 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm29499-201ENSMUST00000189151 486 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm17826-201ENSMUST00000189720 798 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm28329-201ENSMUST00000191208 689 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm29171-201ENSMUST00000191397 486 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cacna1aP97445 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.15□□□□□ -0.62
Cacna1aP97445 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cacna1aP97445 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cacna1aP97445 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cacna1aP97445 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
Cacna1aP97445 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cacna1aP97445 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cacna1aP97445 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm7985-201ENSMUST00000183329 981 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm6644-201ENSMUST00000186507 951 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm18460-201ENSMUST00000208088 464 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm11246-201ENSMUST00000120880 345 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Cacna1aP97445 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm37299-201ENSMUST00000193951 826 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm35713-201ENSMUST00000210516 199 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.14□□□□□ -0.63
Cacna1aP97445 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.14□□□□□ -0.63
Cacna1aP97445 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms