Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 CT010480.4-201ENSMUST00000224654 2283 ntBASIC7.92□□□□□ -1.14
PrkdcP97313 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
PrkdcP97313 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Gm15528-201ENSMUST00000117821 864 ntBASIC7.92□□□□□ -1.14
PrkdcP97313 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
PrkdcP97313 Gm37284-201ENSMUST00000193607 539 ntBASIC7.92□□□□□ -1.14
PrkdcP97313 AC164978.2-201ENSMUST00000226645 857 ntBASIC7.92□□□□□ -1.14
PrkdcP97313 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PrkdcP97313 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
PrkdcP97313 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
PrkdcP97313 Fam220-ps-201ENSMUST00000116535 783 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm7781-201ENSMUST00000117258 788 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm14071-201ENSMUST00000117817 509 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm14740-201ENSMUST00000118538 1150 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm15610-201ENSMUST00000120584 195 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC7.91□□□□□ -1.14
PrkdcP97313 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm7765-201ENSMUST00000182585 974 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm44908-201ENSMUST00000208610 266 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 AC134913.2-201ENSMUST00000225017 771 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 CT025618.1-201ENSMUST00000227409 1279 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 Nsmce2-203ENSMUST00000227173 1122 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm1840-201ENSMUST00000051687 1432 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm25343-201ENSMUST00000157460 107 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm29548-201ENSMUST00000187012 694 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Gm28105-201ENSMUST00000187788 694 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC7.91□□□□□ -1.14
PrkdcP97313 AC154433.1-201ENSMUST00000224401 1183 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm38391-201ENSMUST00000191720 4069 ntBASIC7.91□□□□□ -1.14
PrkdcP97313 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC7.91□□□□□ -1.14
PrkdcP97313 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PrkdcP97313 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms