Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
SgcbP82349 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SgcbP82349 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm14017-201ENSMUST00000121934 386 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.8□□□□□ -0.68
SgcbP82349 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm27627-201ENSMUST00000183644 150 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC10.8□□□□□ -0.68
SgcbP82349 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Gm19994-201ENSMUST00000217086 586 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SgcbP82349 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcbP82349 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.8□□□□□ -0.68
SgcbP82349 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcbP82349 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcbP82349 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.79□□□□□ -0.68
SgcbP82349 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Gm12439-201ENSMUST00000117162 365 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm14277-201ENSMUST00000121195 360 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm14126-201ENSMUST00000122345 395 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.79□□□□□ -0.68
SgcbP82349 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcbP82349 Gm29615-201ENSMUST00000185371 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28224-201ENSMUST00000186078 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm29001-201ENSMUST00000186177 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28292-201ENSMUST00000186593 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28101-201ENSMUST00000187608 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm29076-201ENSMUST00000187689 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28302-201ENSMUST00000187931 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28646-201ENSMUST00000188220 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28205-201ENSMUST00000189177 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm29032-201ENSMUST00000189797 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm28695-201ENSMUST00000190300 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm37448-201ENSMUST00000192795 697 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.79□□□□□ -0.68
SgcbP82349 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm44124-201ENSMUST00000204159 472 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm17812-201ENSMUST00000204935 318 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Gm45224-201ENSMUST00000208203 414 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms