Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.32□□□□□ -0.28
Hmgb1P63158 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm7340-201ENSMUST00000119729 2752 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm11425-201ENSMUST00000119608 498 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm9396-201ENSMUST00000076703 567 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm37447-201ENSMUST00000195625 2928 ntBASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgb1P63158 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgb1P63158 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.3□□□□□ -0.28
Hmgb1P63158 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Rprl1-201ENSMUST00000158050 327 ntBASIC13.3□□□□□ -0.28
Hmgb1P63158 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Gm43133-201ENSMUST00000197472 463 ntBASIC13.3□□□□□ -0.28
Hmgb1P63158 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.3□□□□□ -0.28
Hmgb1P63158 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.3□□□□□ -0.28
Hmgb1P63158 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.3□□□□□ -0.28
Hmgb1P63158 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgb1P63158 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmgb1P63158 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms