Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Snord83b-201ENSMUST00000104546 94 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm38158-201ENSMUST00000194617 339 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Olfr284-202ENSMUST00000206647 966 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm10608-202ENSMUST00000213924 676 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a1P61620 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sec61a1P61620 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Sec61a1P61620 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sec61a1P61620 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Sec61a1P61620 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sec61a1P61620 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sec61a1P61620 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sec61a1P61620 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.65□□□□□ -0.71
Sec61a1P61620 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sec61a1P61620 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm14921-201ENSMUST00000118643 908 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm14723-201ENSMUST00000118686 215 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm29396-201ENSMUST00000185659 716 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm42627-201ENSMUST00000197347 224 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm6334-201ENSMUST00000207083 228 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm18935-201ENSMUST00000212692 664 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.64□□□□□ -0.71
Sec61a1P61620 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.64□□□□□ -0.71
Sec61a1P61620 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sec61a1P61620 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sec61a1P61620 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sec61a1P61620 BC043934-202ENSMUST00000185694 2356 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms