Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm6621-201ENSMUST00000193251 772 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm8099-201ENSMUST00000200510 742 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm5904-201ENSMUST00000210286 865 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdh11P55288 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdh11P55288 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cdh11P55288 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.01□□□□□ -0.65
Cdh11P55288 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Gm26083-201ENSMUST00000157904 193 ntBASIC11.01□□□□□ -0.65
Cdh11P55288 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Gm27320-201ENSMUST00000184892 109 ntBASIC11.01□□□□□ -0.65
Cdh11P55288 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.01□□□□□ -0.65
Cdh11P55288 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cdh11P55288 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
Cdh11P55288 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdh11P55288 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.01□□□□□ -0.65
Cdh11P55288 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.01□□□□□ -0.65
Cdh11P55288 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdh11P55288 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh11P55288 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11□□□□□ -0.65
Cdh11P55288 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11□□□□□ -0.65
Cdh11P55288 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Gm7895-201ENSMUST00000187459 1173 ntBASIC11□□□□□ -0.65
Cdh11P55288 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms