Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nub1P54729 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nub1P54729 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nub1P54729 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Nub1P54729 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nub1P54729 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nub1P54729 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nub1P54729 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.02□□□□□ -0.33
Nub1P54729 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.02□□□□□ -0.33
Nub1P54729 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.02□□□□□ -0.33
Nub1P54729 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.02□□□□□ -0.33
Nub1P54729 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.02□□□□□ -0.33
Nub1P54729 Gm44967-201ENSMUST00000207047 631 ntBASIC13.02□□□□□ -0.33
Nub1P54729 Gm13097-201ENSMUST00000210722 397 ntBASIC13.02□□□□□ -0.33
Nub1P54729 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.02□□□□□ -0.33
Nub1P54729 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.02□□□□□ -0.33
Nub1P54729 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nub1P54729 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nub1P54729 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nub1P54729 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.01□□□□□ -0.33
Nub1P54729 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm23912-201ENSMUST00000104687 87 ntBASIC13.01□□□□□ -0.33
Nub1P54729 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.01□□□□□ -0.33
Nub1P54729 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.01□□□□□ -0.33
Nub1P54729 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.01□□□□□ -0.33
Nub1P54729 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.01□□□□□ -0.33
Nub1P54729 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nub1P54729 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.01□□□□□ -0.33
Nub1P54729 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.01□□□□□ -0.33
Nub1P54729 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nub1P54729 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nub1P54729 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms