Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cacnb3P54285 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacnb3P54285 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cacnb3P54285 Gm25076-201ENSMUST00000104098 132 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm11451-201ENSMUST00000118946 630 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm15610-201ENSMUST00000120584 195 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Mir1956-201ENSMUST00000157748 65 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm9630-201ENSMUST00000178304 885 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm7593-201ENSMUST00000187246 644 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm28324-201ENSMUST00000187913 264 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm29499-201ENSMUST00000189151 486 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm28329-201ENSMUST00000191208 689 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm29171-201ENSMUST00000191397 486 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm37028-201ENSMUST00000194276 107 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
Cacnb3P54285 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.02□□□□□ -0.17
Cacnb3P54285 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacnb3P54285 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cacnb3P54285 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacnb3P54285 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.01□□□□□ -0.17
Cacnb3P54285 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cacnb3P54285 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cacnb3P54285 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacnb3P54285 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cacnb3P54285 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.01□□□□□ -0.17
Cacnb3P54285 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Gm29155-201ENSMUST00000185910 269 ntBASIC14.01□□□□□ -0.17
Cacnb3P54285 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.01□□□□□ -0.17
Cacnb3P54285 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacnb3P54285 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.01□□□□□ -0.17
Cacnb3P54285 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.01□□□□□ -0.17
Cacnb3P54285 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacnb3P54285 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms