Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Msh6P54276 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
Msh6P54276 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.21■□□□□ 0.02
Msh6P54276 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh6P54276 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh6P54276 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh6P54276 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh6P54276 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Msh6P54276 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Msh6P54276 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Msh6P54276 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Msh6P54276 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Msh6P54276 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.2■□□□□ 0.02
Msh6P54276 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.2■□□□□ 0.02
Msh6P54276 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.2■□□□□ 0.02
Msh6P54276 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh6P54276 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.2■□□□□ 0.02
Msh6P54276 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Msh6P54276 Gm2875-201ENSMUST00000211333 360 ntBASIC15.2■□□□□ 0.02
Msh6P54276 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh6P54276 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.2■□□□□ 0.02
Msh6P54276 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Msh6P54276 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh6P54276 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh6P54276 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Msh6P54276 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Msh6P54276 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Msh6P54276 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.19■□□□□ 0.02
Msh6P54276 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Gm25076-201ENSMUST00000104098 132 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Gm24844-201ENSMUST00000158679 127 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh6P54276 Gm18367-201ENSMUST00000176139 600 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.19■□□□□ 0.02
Msh6P54276 Gm3551-201ENSMUST00000190750 664 ntBASIC15.19■□□□□ 0.02
Msh6P54276 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Msh6P54276 Gm19009-201ENSMUST00000223072 823 ntBASIC15.19■□□□□ 0.02
Msh6P54276 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh6P54276 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Msh6P54276 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh6P54276 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.18■□□□□ 0.02
Msh6P54276 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Msh6P54276 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Msh6P54276 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Gm12628-201ENSMUST00000122193 382 ntBASIC15.18■□□□□ 0.02
Msh6P54276 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Msh6P54276 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms