Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Gm28833-201ENSMUST00000189671 559 ntBASIC12.33□□□□□ -0.44
Sox1P53783 Gm43547-201ENSMUST00000197729 328 ntBASIC12.33□□□□□ -0.44
Sox1P53783 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Gm45094-201ENSMUST00000207013 617 ntBASIC12.33□□□□□ -0.44
Sox1P53783 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.33□□□□□ -0.44
Sox1P53783 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sox1P53783 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Sox1P53783 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox1P53783 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm14234-201ENSMUST00000119539 845 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Gm3150-201ENSMUST00000166418 204 ntBASIC12.32□□□□□ -0.44
Sox1P53783 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm6331-201ENSMUST00000217890 450 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.32□□□□□ -0.44
Sox1P53783 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox1P53783 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox1P53783 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Sox1P53783 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox1P53783 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox1P53783 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sox1P53783 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Gm24078-201ENSMUST00000158184 103 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Gm37981-201ENSMUST00000194280 535 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Sox1P53783 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.31□□□□□ -0.44
Sox1P53783 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Gm5451-201ENSMUST00000080545 579 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox1P53783 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms