Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pdx1P52946 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pdx1P52946 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.92□□□□□ -0.5
Pdx1P52946 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pdx1P52946 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.91□□□□□ -0.5
Pdx1P52946 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pdx1P52946 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.91□□□□□ -0.5
Pdx1P52946 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Pdx1P52946 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Pdx1P52946 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Gm4857-201ENSMUST00000192718 785 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm9136-201ENSMUST00000193368 454 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Gm18893-201ENSMUST00000198416 943 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Gm8913-201ENSMUST00000209491 641 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.91□□□□□ -0.5
Pdx1P52946 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdx1P52946 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pdx1P52946 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.91□□□□□ -0.5
Pdx1P52946 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pdx1P52946 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pdx1P52946 Mir877-201ENSMUST00000104738 85 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 Gm13996-201ENSMUST00000118456 430 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.9□□□□□ -0.5
Pdx1P52946 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdx1P52946 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdx1P52946 Gm43962-201ENSMUST00000203898 190 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdx1P52946 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdx1P52946 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.9□□□□□ -0.5
Pdx1P52946 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Pdx1P52946 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdx1P52946 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms