Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Btrc-209ENSMUST00000224478 2194 ntBASIC11.6□□□□□ -0.55
Prox1P48437 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.59□□□□□ -0.55
Prox1P48437 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Prox1P48437 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.59□□□□□ -0.55
Prox1P48437 Mir1938-201ENSMUST00000158746 100 ntBASIC11.59□□□□□ -0.55
Prox1P48437 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Prox1P48437 AY702102-202ENSMUST00000194651 1173 ntBASIC11.59□□□□□ -0.55
Prox1P48437 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.59□□□□□ -0.55
Prox1P48437 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.59□□□□□ -0.55
Prox1P48437 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.59□□□□□ -0.55
Prox1P48437 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.59□□□□□ -0.55
Prox1P48437 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.59□□□□□ -0.55
Prox1P48437 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prox1P48437 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Prox1P48437 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Prox1P48437 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.58□□□□□ -0.56
Prox1P48437 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.58□□□□□ -0.56
Prox1P48437 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.58□□□□□ -0.56
Prox1P48437 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Prox1P48437 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.58□□□□□ -0.56
Prox1P48437 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.58□□□□□ -0.56
Prox1P48437 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Prox1P48437 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.58□□□□□ -0.56
Prox1P48437 Gm24196-201ENSMUST00000179161 110 ntBASIC11.58□□□□□ -0.56
Prox1P48437 Gm27331-201ENSMUST00000183705 60 ntBASIC11.58□□□□□ -0.56
Prox1P48437 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Prox1P48437 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Gm10012-201ENSMUST00000078252 192 ntBASIC11.58□□□□□ -0.56
Prox1P48437 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Prox1P48437 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.58□□□□□ -0.56
Prox1P48437 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Prox1P48437 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Prox1P48437 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Prox1P48437 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Prox1P48437 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.58□□□□□ -0.56
Prox1P48437 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Prox1P48437 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prox1P48437 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms