Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Vps4bP46467 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vps4bP46467 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vps4bP46467 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.25□□□□□ -0.45
Vps4bP46467 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps4bP46467 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.24□□□□□ -0.45
Vps4bP46467 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm13875-201ENSMUST00000120162 282 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm26083-201ENSMUST00000157904 193 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm2546-201ENSMUST00000182630 991 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm27501-201ENSMUST00000183599 107 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm19309-201ENSMUST00000218295 205 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vps4bP46467 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vps4bP46467 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.24□□□□□ -0.45
Vps4bP46467 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.24□□□□□ -0.45
Vps4bP46467 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps4bP46467 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps4bP46467 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps4bP46467 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps4bP46467 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps4bP46467 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.23□□□□□ -0.45
Vps4bP46467 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms