Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm28882-201ENSMUST00000185504 314 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.62□□□□□ -0.55
Tnfsf4P43488 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Rprl1-201ENSMUST00000158050 327 ntBASIC11.62□□□□□ -0.55
Tnfsf4P43488 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gm9136-201ENSMUST00000193368 454 ntBASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.62□□□□□ -0.55
Tnfsf4P43488 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfsf4P43488 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfsf4P43488 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm14660-201ENSMUST00000119809 575 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm14247-201ENSMUST00000120950 237 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms