Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
HttP42859 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.43□□□□□ -0.42
HttP42859 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.43□□□□□ -0.42
HttP42859 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
HttP42859 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.43□□□□□ -0.42
HttP42859 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.42□□□□□ -0.42
HttP42859 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Gm5529-201ENSMUST00000165691 891 ntBASIC12.42□□□□□ -0.42
HttP42859 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.42□□□□□ -0.42
HttP42859 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HttP42859 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.42□□□□□ -0.42
HttP42859 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.42□□□□□ -0.42
HttP42859 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.42□□□□□ -0.42
HttP42859 Gm7765-201ENSMUST00000182585 974 ntBASIC12.42□□□□□ -0.42
HttP42859 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.42□□□□□ -0.42
HttP42859 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.42□□□□□ -0.42
HttP42859 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
HttP42859 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.42□□□□□ -0.42
HttP42859 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HttP42859 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Gm14639-201ENSMUST00000120850 866 ntBASIC12.41□□□□□ -0.42
HttP42859 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.41□□□□□ -0.42
HttP42859 Gm16228-201ENSMUST00000162286 809 ntBASIC12.41□□□□□ -0.42
HttP42859 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.41□□□□□ -0.42
HttP42859 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.41□□□□□ -0.42
HttP42859 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
HttP42859 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HttP42859 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Gm8111-201ENSMUST00000117659 987 ntBASIC12.41□□□□□ -0.42
HttP42859 Gm18555-201ENSMUST00000197935 584 ntBASIC12.41□□□□□ -0.42
HttP42859 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.41□□□□□ -0.42
HttP42859 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HttP42859 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Gm25148-201ENSMUST00000104611 123 ntBASIC12.4□□□□□ -0.42
HttP42859 Mir453-201ENSMUST00000104732 82 ntBASIC12.4□□□□□ -0.42
HttP42859 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Gm5291-201ENSMUST00000201965 899 ntBASIC12.4□□□□□ -0.42
HttP42859 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.4□□□□□ -0.42
HttP42859 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.4□□□□□ -0.42
HttP42859 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.4□□□□□ -0.42
HttP42859 Gm8601-201ENSMUST00000182096 909 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms