Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm6458-201ENSMUST00000211573 635 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Itm2b-204ENSMUST00000228637 783 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.38□□□□□ -0.75
Slc6a1P31648 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.38□□□□□ -0.75
Slc6a1P31648 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Gm13689-201ENSMUST00000119360 685 ntBASIC10.38□□□□□ -0.75
Slc6a1P31648 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.38□□□□□ -0.75
Slc6a1P31648 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.38□□□□□ -0.75
Slc6a1P31648 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc6a1P31648 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Slc6a1P31648 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm24231-201ENSMUST00000104315 133 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm12390-201ENSMUST00000117897 397 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms