Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm12241-201ENSMUST00000118330 726 ntBASIC9.4□□□□□ -0.9
Ccl6P27784 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Ccl6P27784 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl6P27784 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.4□□□□□ -0.9
Ccl6P27784 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Ccl6P27784 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.4□□□□□ -0.9
Ccl6P27784 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.4□□□□□ -0.9
Ccl6P27784 Gm6621-201ENSMUST00000193251 772 ntBASIC9.4□□□□□ -0.9
Ccl6P27784 Gm30285-201ENSMUST00000214614 422 ntBASIC9.4□□□□□ -0.9
Ccl6P27784 Gm9368-201ENSMUST00000219348 831 ntBASIC9.4□□□□□ -0.9
Ccl6P27784 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl6P27784 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ccl6P27784 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl6P27784 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ccl6P27784 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl6P27784 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl6P27784 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl6P27784 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Ccl6P27784 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.4□□□□□ -0.91
Ccl6P27784 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl6P27784 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.4□□□□□ -0.91
Ccl6P27784 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.4□□□□□ -0.91
Ccl6P27784 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Ccl6P27784 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm24830-201ENSMUST00000102024 166 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Gm24934-201ENSMUST00000103764 111 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.39□□□□□ -0.91
Ccl6P27784 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm24845-201ENSMUST00000158034 109 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.39□□□□□ -0.91
Ccl6P27784 Mir8109-201ENSMUST00000184375 117 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.39□□□□□ -0.91
Ccl6P27784 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Gm26232-201ENSMUST00000083360 166 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.39□□□□□ -0.91
Ccl6P27784 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl6P27784 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Ccl6P27784 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl6P27784 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl6P27784 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl6P27784 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl6P27784 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl6P27784 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl6P27784 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl6P27784 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl6P27784 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Ccl6P27784 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms