Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 AC132433.1-201ENSMUST00000221553 1101 ntBASIC10.13□□□□□ -0.79
Tnfrsf9P20334 AC173482.2-201ENSMUST00000224044 750 ntBASIC10.13□□□□□ -0.79
Tnfrsf9P20334 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.13□□□□□ -0.79
Tnfrsf9P20334 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Tnfrsf9P20334 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm13033-201ENSMUST00000117591 1057 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Mir1943-201ENSMUST00000158276 73 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm20426-201ENSMUST00000173657 440 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm37215-201ENSMUST00000194927 1259 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm37017-201ENSMUST00000195266 747 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm44262-201ENSMUST00000204969 372 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Tnfrsf9P20334 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf9P20334 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms