Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.55□□□□□ -0.56
Lire1P11260 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.55□□□□□ -0.56
Lire1P11260 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lire1P11260 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Gm7340-201ENSMUST00000119729 2752 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Gm6023-201ENSMUST00000118217 606 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Gm4986-201ENSMUST00000119731 549 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.54□□□□□ -0.56
Lire1P11260 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.54□□□□□ -0.56
Lire1P11260 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.54□□□□□ -0.56
Lire1P11260 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.54□□□□□ -0.56
Lire1P11260 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Gm10608-202ENSMUST00000213924 676 ntBASIC11.54□□□□□ -0.56
Lire1P11260 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.54□□□□□ -0.56
Lire1P11260 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.54□□□□□ -0.56
Lire1P11260 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lire1P11260 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.54□□□□□ -0.56
Lire1P11260 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
Lire1P11260 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.53□□□□□ -0.56
Lire1P11260 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lire1P11260 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.53□□□□□ -0.56
Lire1P11260 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.53□□□□□ -0.56
Lire1P11260 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lire1P11260 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lire1P11260 Gm16202-201ENSMUST00000117532 544 ntBASIC11.53□□□□□ -0.56
Lire1P11260 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lire1P11260 Mir7221-201ENSMUST00000184009 72 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms