Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Polr2aP08775 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Polr2aP08775 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Polr2aP08775 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Polr2aP08775 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.52□□□□□ -0.25
Polr2aP08775 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Polr2aP08775 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Polr2aP08775 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.52□□□□□ -0.25
Polr2aP08775 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.52□□□□□ -0.25
Polr2aP08775 Gm18035-201ENSMUST00000211962 589 ntBASIC13.52□□□□□ -0.25
Polr2aP08775 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Polr2aP08775 Capsl-202ENSMUST00000226688 739 ntBASIC13.52□□□□□ -0.25
Polr2aP08775 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Polr2aP08775 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Polr2aP08775 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Polr2aP08775 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Polr2aP08775 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Polr2aP08775 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm27956-201ENSMUST00000175604 260 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Gm23694-201ENSMUST00000179335 110 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.51□□□□□ -0.25
Polr2aP08775 Trav11n-201ENSMUST00000200113 343 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Gm43969-201ENSMUST00000204833 535 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm9487-201ENSMUST00000216600 472 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm5449-201ENSMUST00000081132 357 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Polr2aP08775 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Polr2aP08775 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm8111-201ENSMUST00000117659 987 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Gm16459-201ENSMUST00000121443 686 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm25569-201ENSMUST00000157175 131 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.51□□□□□ -0.25
Polr2aP08775 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.51□□□□□ -0.25
Polr2aP08775 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.51□□□□□ -0.25
Polr2aP08775 AC154759.1-201ENSMUST00000224137 1159 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Gm5468-202ENSMUST00000227851 682 ntBASIC13.51□□□□□ -0.25
Polr2aP08775 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Polr2aP08775 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Polr2aP08775 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.5□□□□□ -0.25
Polr2aP08775 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.5□□□□□ -0.25
Polr2aP08775 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Polr2aP08775 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
Polr2aP08775 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Polr2aP08775 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Polr2aP08775 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.5□□□□□ -0.25
Polr2aP08775 Gm25492-201ENSMUST00000157383 129 ntBASIC13.5□□□□□ -0.25
Polr2aP08775 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.5□□□□□ -0.25
Polr2aP08775 Gm8451-201ENSMUST00000170338 447 ntBASIC13.5□□□□□ -0.25
Polr2aP08775 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.5□□□□□ -0.25
Polr2aP08775 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms