Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CfdP03953 Gm12314-201ENSMUST00000118104 538 ntBASIC10.06□□□□□ -0.8
CfdP03953 Gm11803-201ENSMUST00000119966 444 ntBASIC10.06□□□□□ -0.8
CfdP03953 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CfdP03953 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.06□□□□□ -0.8
CfdP03953 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.06□□□□□ -0.8
CfdP03953 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.06□□□□□ -0.8
CfdP03953 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.06□□□□□ -0.8
CfdP03953 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CfdP03953 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.06□□□□□ -0.8
CfdP03953 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CfdP03953 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.06□□□□□ -0.8
CfdP03953 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.06□□□□□ -0.8
CfdP03953 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.05□□□□□ -0.8
CfdP03953 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.05□□□□□ -0.8
CfdP03953 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.05□□□□□ -0.8
CfdP03953 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gm12203-201ENSMUST00000118235 598 ntBASIC10.05□□□□□ -0.8
CfdP03953 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gm12209-201ENSMUST00000120089 596 ntBASIC10.05□□□□□ -0.8
CfdP03953 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Mir6956-201ENSMUST00000183598 62 ntBASIC10.05□□□□□ -0.8
CfdP03953 Gm37917-201ENSMUST00000194711 392 ntBASIC10.05□□□□□ -0.8
CfdP03953 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.05□□□□□ -0.8
CfdP03953 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.05□□□□□ -0.8
CfdP03953 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.05□□□□□ -0.8
CfdP03953 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CfdP03953 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CfdP03953 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
CfdP03953 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CfdP03953 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CfdP03953 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CfdP03953 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.04□□□□□ -0.8
CfdP03953 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
CfdP03953 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CfdP03953 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CfdP03953 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CfdP03953 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CfdP03953 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.04□□□□□ -0.8
CfdP03953 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms