Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Vamp4O70480 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Vamp4O70480 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.14■□□□□ 0.01
Vamp4O70480 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.14■□□□□ 0.01
Vamp4O70480 Gm8100-201ENSMUST00000182906 988 ntBASIC15.14■□□□□ 0.01
Vamp4O70480 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.14■□□□□ 0.01
Vamp4O70480 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.14■□□□□ 0.01
Vamp4O70480 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Vamp4O70480 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vamp4O70480 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vamp4O70480 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Vamp4O70480 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.14■□□□□ 0.01
Vamp4O70480 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Vamp4O70480 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vamp4O70480 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Vamp4O70480 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vamp4O70480 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vamp4O70480 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Vamp4O70480 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Gm6114-201ENSMUST00000182472 968 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vamp4O70480 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 Gm4482-201ENSMUST00000200876 742 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 Gm6867-201ENSMUST00000219165 425 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Vamp4O70480 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vamp4O70480 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.13■□□□□ 0.01
Vamp4O70480 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.13■□□□□ 0.01
Vamp4O70480 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.13■□□□□ 0.01
Vamp4O70480 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vamp4O70480 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Vamp4O70480 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Gm13722-201ENSMUST00000117964 3066 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
Vamp4O70480 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vamp4O70480 Gm13035-201ENSMUST00000117496 342 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Gm38117-201ENSMUST00000194653 939 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Gm38314-201ENSMUST00000195709 625 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Gm2965-201ENSMUST00000198365 343 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Gm6450-201ENSMUST00000200896 574 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.12■□□□□ 0.01
Vamp4O70480 Gm19208-201ENSMUST00000213861 912 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.12■□□□□ 0.01
Vamp4O70480 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms