Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarce1O54941 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarce1O54941 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarce1O54941 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 Gm15610-201ENSMUST00000120584 195 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Gm13316-201ENSMUST00000140537 691 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Rprl1-201ENSMUST00000158050 327 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Smarce1O54941 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.31□□□□□ -0.12
Smarce1O54941 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarce1O54941 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Smarce1O54941 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.31□□□□□ -0.12
Smarce1O54941 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarce1O54941 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarce1O54941 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.3□□□□□ -0.12
Smarce1O54941 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarce1O54941 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm14660-201ENSMUST00000119809 575 ntBASIC14.3□□□□□ -0.12
Smarce1O54941 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm2546-201ENSMUST00000182630 991 ntBASIC14.3□□□□□ -0.12
Smarce1O54941 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm38241-201ENSMUST00000192641 898 ntBASIC14.3□□□□□ -0.12
Smarce1O54941 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarce1O54941 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarce1O54941 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm9996-201ENSMUST00000070359 913 ntBASIC14.3□□□□□ -0.12
Smarce1O54941 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarce1O54941 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarce1O54941 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarce1O54941 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smarce1O54941 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarce1O54941 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Smarce1O54941 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms