Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Gm11439-201ENSMUST00000118598 409 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.79□□□□□ -0.52
Npc1O35604 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Gm17812-201ENSMUST00000204935 318 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Gm8913-201ENSMUST00000209491 641 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Gm19208-201ENSMUST00000213861 912 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.79□□□□□ -0.52
Npc1O35604 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Npc1O35604 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Npc1O35604 Gm14277-201ENSMUST00000121195 360 ntBASIC11.78□□□□□ -0.52
Npc1O35604 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.78□□□□□ -0.52
Npc1O35604 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Gm27627-201ENSMUST00000183644 150 ntBASIC11.78□□□□□ -0.52
Npc1O35604 Gm37466-201ENSMUST00000195692 652 ntBASIC11.78□□□□□ -0.52
Npc1O35604 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.78□□□□□ -0.52
Npc1O35604 AY036118-201ENSMUST00000200021 923 ntBASIC11.78□□□□□ -0.52
Npc1O35604 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.78□□□□□ -0.52
Npc1O35604 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Gm8385-201ENSMUST00000058999 643 ntBASIC11.78□□□□□ -0.52
Npc1O35604 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Npc1O35604 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.78□□□□□ -0.52
Npc1O35604 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Npc1O35604 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Npc1O35604 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.77□□□□□ -0.52
Npc1O35604 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Npc1O35604 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.77□□□□□ -0.52
Npc1O35604 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.77□□□□□ -0.52
Npc1O35604 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Npc1O35604 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Npc1O35604 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Npc1O35604 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Npc1O35604 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Npc1O35604 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Npc1O35604 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.77□□□□□ -0.52
Npc1O35604 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Npc1O35604 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms