Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm15824-201ENSMUST00000119516 955 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Gm13315-201ENSMUST00000120376 991 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm7561-201ENSMUST00000211203 886 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.53□□□□□ -0.88
Efnb3O35393 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Efnb3O35393 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.53□□□□□ -0.88
Efnb3O35393 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.53□□□□□ -0.88
Efnb3O35393 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Efnb3O35393 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Efnb3O35393 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Efnb3O35393 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Efnb3O35393 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Efnb3O35393 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.52□□□□□ -0.88
Efnb3O35393 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Efnb3O35393 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Efnb3O35393 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Efnb3O35393 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.52□□□□□ -0.89
Efnb3O35393 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Efnb3O35393 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.52□□□□□ -0.89
Efnb3O35393 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.52□□□□□ -0.89
Efnb3O35393 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.52□□□□□ -0.89
Efnb3O35393 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.52□□□□□ -0.89
Efnb3O35393 Gm44958-201ENSMUST00000203734 736 ntBASIC9.52□□□□□ -0.89
Efnb3O35393 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.52□□□□□ -0.89
Efnb3O35393 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.52□□□□□ -0.89
Efnb3O35393 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.52□□□□□ -0.89
Efnb3O35393 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.52□□□□□ -0.89
Efnb3O35393 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Efnb3O35393 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Efnb3O35393 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.52□□□□□ -0.89
Efnb3O35393 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms