Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.1□□□□□ -0.15
Tcof1O08784 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tcof1O08784 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.1□□□□□ -0.15
Tcof1O08784 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Gm11511-201ENSMUST00000118146 540 ntBASIC14.1□□□□□ -0.15
Tcof1O08784 Gm12266-201ENSMUST00000120311 962 ntBASIC14.1□□□□□ -0.15
Tcof1O08784 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tcof1O08784 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.1□□□□□ -0.15
Tcof1O08784 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.1□□□□□ -0.15
Tcof1O08784 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tcof1O08784 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tcof1O08784 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.1□□□□□ -0.15
Tcof1O08784 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Tcof1O08784 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tcof1O08784 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.09□□□□□ -0.15
Tcof1O08784 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.09□□□□□ -0.15
Tcof1O08784 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tcof1O08784 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Tcof1O08784 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tcof1O08784 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Tcof1O08784 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Gm18038-201ENSMUST00000197900 485 ntBASIC14.09□□□□□ -0.15
Tcof1O08784 Gm44100-201ENSMUST00000204329 436 ntBASIC14.09□□□□□ -0.15
Tcof1O08784 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.09□□□□□ -0.15
Tcof1O08784 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.09□□□□□ -0.15
Tcof1O08784 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tcof1O08784 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tcof1O08784 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tcof1O08784 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tcof1O08784 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tcof1O08784 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tcof1O08784 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.08□□□□□ -0.15
Tcof1O08784 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tcof1O08784 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tcof1O08784 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tcof1O08784 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Tcof1O08784 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tcof1O08784 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tcof1O08784 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.08□□□□□ -0.16
Tcof1O08784 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.08□□□□□ -0.16
Tcof1O08784 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.08□□□□□ -0.16
Tcof1O08784 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tcof1O08784 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.08□□□□□ -0.16
Tcof1O08784 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.08□□□□□ -0.16
Tcof1O08784 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tcof1O08784 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.08□□□□□ -0.16
Tcof1O08784 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.08□□□□□ -0.16
Tcof1O08784 Gm5369-201ENSMUST00000217499 588 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.08□□□□□ -0.16
Tcof1O08784 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms