Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm13492-201ENSMUST00000119772 665 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm4271-201ENSMUST00000174444 973 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm9908-201ENSMUST00000211534 448 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gm12502-201ENSMUST00000120197 444 ntBASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gm6244-201ENSMUST00000178732 841 ntBASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gm39404-201ENSMUST00000216350 313 ntBASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa8J3QNX5 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm24830-201ENSMUST00000102024 166 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm14928-201ENSMUST00000120198 477 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms