Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.34□□□□□ -0.59
Colca2F8VPY8 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.34□□□□□ -0.59
Colca2F8VPY8 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.34□□□□□ -0.59
Colca2F8VPY8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.34□□□□□ -0.59
Colca2F8VPY8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Colca2F8VPY8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm11578-201ENSMUST00000118530 459 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm14993-201ENSMUST00000121180 164 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm9081-201ENSMUST00000182346 991 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm7719-201ENSMUST00000182374 975 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Mir8093-201ENSMUST00000185043 137 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm18776-201ENSMUST00000188833 654 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm8197-202ENSMUST00000193422 934 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm5982-201ENSMUST00000196234 512 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm4978-201ENSMUST00000071565 801 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm8894-201ENSMUST00000074642 666 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.33□□□□□ -0.6
Colca2F8VPY8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Colca2F8VPY8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms