Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh17E9PXF0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Gm22133-201ENSMUST00000102082 109 ntBASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Gm44100-201ENSMUST00000204329 436 ntBASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh17E9PXF0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm22334-201ENSMUST00000158070 133 ntBASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Spcs1-203ENSMUST00000226374 592 ntBASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms