Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28043E0CXC2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm12957-201ENSMUST00000117835 377 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm12502-201ENSMUST00000120197 444 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm8738-201ENSMUST00000172606 329 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm19309-201ENSMUST00000218295 205 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28043E0CXC2 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm12742-201ENSMUST00000117326 410 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm8062-201ENSMUST00000139696 444 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms