Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm34379-201ENSMUST00000195036 290 ntBASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm42655-201ENSMUST00000202782 1134 ntBASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm37122-201ENSMUST00000195313 1567 ntBASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm12663-201ENSMUST00000118481 958 ntBASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm15617-201ENSMUST00000118973 771 ntBASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn7aB1AYL1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC15.18■□□□□ 0.02
Scn7aB1AYL1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gm25562-201ENSMUST00000104608 133 ntBASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gm9081-201ENSMUST00000182346 991 ntBASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gm43163-201ENSMUST00000196571 442 ntBASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.17■□□□□ 0.02
Scn7aB1AYL1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn7aB1AYL1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm7541-201ENSMUST00000118361 535 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm24248-201ENSMUST00000157321 322 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm22379-201ENSMUST00000157480 131 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm10254-201ENSMUST00000052888 867 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm13135-201ENSMUST00000117628 3121 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm15197-201ENSMUST00000120526 478 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms