Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm22846-201ENSMUST00000157706 270 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm30946-201ENSMUST00000198288 724 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm5599-201ENSMUST00000209602 788 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.15□□□□□ -0.46
Col4a6B1AVK5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Gm12943-201ENSMUST00000119616 210 ntBASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Gm9507-202ENSMUST00000180157 654 ntBASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Mir7051-201ENSMUST00000184167 73 ntBASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Gm44323-201ENSMUST00000198689 129 ntBASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col4a6B1AVK5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a6B1AVK5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Gm24992-201ENSMUST00000157412 130 ntBASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Gm16030-201ENSMUST00000159098 603 ntBASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.14□□□□□ -0.47
Col4a6B1AVK5 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms