Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Chd3B1AR17 Gm9630-201ENSMUST00000178304 885 ntBASIC11.81□□□□□ -0.52
Chd3B1AR17 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.81□□□□□ -0.52
Chd3B1AR17 Gm12407-201ENSMUST00000180219 324 ntBASIC11.81□□□□□ -0.52
Chd3B1AR17 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.81□□□□□ -0.52
Chd3B1AR17 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.81□□□□□ -0.52
Chd3B1AR17 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.81□□□□□ -0.52
Chd3B1AR17 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chd3B1AR17 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chd3B1AR17 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd3B1AR17 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Chd3B1AR17 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chd3B1AR17 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm22711-201ENSMUST00000116890 133 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm13263-201ENSMUST00000121271 838 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm12579-201ENSMUST00000118040 783 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm6407-201ENSMUST00000176468 549 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd3B1AR17 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.8□□□□□ -0.52
Chd3B1AR17 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd3B1AR17 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm10731-201ENSMUST00000181171 448 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms