Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm10584-201ENSMUST00000207036 2628 ntBASIC6.17□□□□□ -1.42
Ubr4A2AN08 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm13777-201ENSMUST00000118208 345 ntBASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm25804-201ENSMUST00000122785 188 ntBASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm22915-201ENSMUST00000157615 136 ntBASIC6.17□□□□□ -1.42
Ubr4A2AN08 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC6.17□□□□□ -1.42
Ubr4A2AN08 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Chn2-203ENSMUST00000114401 1269 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Gm37284-201ENSMUST00000193607 539 ntBASIC6.17□□□□□ -1.42
Ubr4A2AN08 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ubr4A2AN08 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm9372-201ENSMUST00000168454 430 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm17044-201ENSMUST00000168549 828 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 AC127583.1-201ENSMUST00000224351 540 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm15285-201ENSMUST00000119271 473 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 n-R5s130-201ENSMUST00000178128 119 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm24312-201ENSMUST00000178677 119 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 n-R5s106-201ENSMUST00000179060 119 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 n-R5s118-201ENSMUST00000179887 119 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm3116-201ENSMUST00000189440 1116 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm5845-201ENSMUST00000195812 796 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm44304-201ENSMUST00000200509 145 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm45504-201ENSMUST00000211407 2107 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm15889-202ENSMUST00000212669 2443 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm11189-201ENSMUST00000117979 375 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm43965-201ENSMUST00000203779 789 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 1056.9 ms