Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Cts7-204ENSMUST00000225321 1257 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb2S4R1M3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm7722-201ENSMUST00000120646 741 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb2S4R1M3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms