Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Gm44980-201ENSMUST00000205826 314 ntBASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn8aQ9WTU3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn8aQ9WTU3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms