Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm12731-201ENSMUST00000120932 268 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm14368-201ENSMUST00000145305 415 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm29155-201ENSMUST00000185910 269 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm29663-201ENSMUST00000186962 853 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm43595-201ENSMUST00000196464 1071 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm4607-201ENSMUST00000206649 577 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm10688-201ENSMUST00000214985 520 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 AC140409.4-201ENSMUST00000215757 538 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 AC162857.1-201ENSMUST00000226614 400 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 AC123658.1-201ENSMUST00000228364 867 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Myl1-201ENSMUST00000027151 1082 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx6Q9R1R0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm10434-201ENSMUST00000101158 471 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm23987-201ENSMUST00000117039 129 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm8215-201ENSMUST00000120627 990 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm13665-201ENSMUST00000120830 528 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm14848-201ENSMUST00000121850 467 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm8737-201ENSMUST00000122208 642 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm25179-201ENSMUST00000122632 128 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm18200-201ENSMUST00000173265 833 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm18190-201ENSMUST00000174801 832 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm38320-201ENSMUST00000192767 1281 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm42509-201ENSMUST00000197390 781 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 AC164297.5-201ENSMUST00000224365 198 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Olfr844-201ENSMUST00000054106 930 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx6Q9R1R0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms