Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh17Q9R100 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh17Q9R100 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh17Q9R100 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Gm5187-201ENSMUST00000117317 991 ntBASIC11.75□□□□□ -0.53
Cdh17Q9R100 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.75□□□□□ -0.53
Cdh17Q9R100 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh17Q9R100 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm15610-201ENSMUST00000120584 195 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm12164-201ENSMUST00000121695 551 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm43118-201ENSMUST00000199149 775 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh17Q9R100 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Cdh17Q9R100 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms