Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Gm18038-201ENSMUST00000197900 485 ntBASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Gm17931-201ENSMUST00000208132 634 ntBASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Gm18730-201ENSMUST00000218038 343 ntBASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf3Q9QXK7 Map1b-203ENSMUST00000223725 2669 ntBASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm8343-201ENSMUST00000182705 994 ntBASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf3Q9QXK7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm12266-201ENSMUST00000120311 962 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm25732-201ENSMUST00000175168 60 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Rps4l-202ENSMUST00000204242 789 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm4157-201ENSMUST00000211647 679 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf3Q9QXK7 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf3Q9QXK7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf3Q9QXK7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms