Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm14208-201ENSMUST00000119645 678 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm11660-201ENSMUST00000120955 412 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm14017-201ENSMUST00000121934 386 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm19287-201ENSMUST00000203190 358 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm270-201ENSMUST00000223010 976 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk3aQ9JKX8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Upk3aQ9JKX8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Upk3aQ9JKX8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm11509-201ENSMUST00000117358 325 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm15711-201ENSMUST00000118889 535 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm28071-201ENSMUST00000190355 478 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm18038-201ENSMUST00000197900 485 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm4157-201ENSMUST00000211647 679 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Upk3aQ9JKX8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms