Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rgr-203ENSMUST00000225070 4704 ntBASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Mir7654-201ENSMUST00000185082 70 ntBASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Gm43002-201ENSMUST00000200310 155 ntBASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmgn3Q9DCB1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm37917-201ENSMUST00000194711 392 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm18624-201ENSMUST00000220966 658 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm807-202ENSMUST00000224929 408 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm24526-201ENSMUST00000082921 158 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmgn3Q9DCB1 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms