Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm5687-201ENSMUST00000118252 640 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm13616-201ENSMUST00000120600 222 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm17208-201ENSMUST00000168388 535 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm16296-201ENSMUST00000159905 325 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm5354-201ENSMUST00000182417 973 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm44397-201ENSMUST00000195950 113 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm2213-201ENSMUST00000197485 688 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3a3Q9D554 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm14921-201ENSMUST00000118643 908 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm15703-201ENSMUST00000120250 880 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm26308-201ENSMUST00000157768 69 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms