Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Gm38314-201ENSMUST00000195709 625 ntBASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7Q9D541 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm6114-201ENSMUST00000182472 968 ntBASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm9230-201ENSMUST00000188228 532 ntBASIC14.07□□□□□ -0.16
Ccdc7Q9D541 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm43433-201ENSMUST00000196573 481 ntBASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm8420-201ENSMUST00000097103 598 ntBASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc7Q9D541 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc7Q9D541 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.06□□□□□ -0.16
Ccdc7Q9D541 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Gm11989-201ENSMUST00000117240 672 ntBASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Gm11362-201ENSMUST00000118838 850 ntBASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Gm8062-201ENSMUST00000139696 444 ntBASIC14.05□□□□□ -0.16
Ccdc7Q9D541 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms