Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm28631-201ENSMUST00000190740 334 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm37042-201ENSMUST00000193816 581 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 AC102523.2-201ENSMUST00000227813 983 ntBASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim42Q9D2H5 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm24526-201ENSMUST00000082921 158 ntBASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim42Q9D2H5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms