Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rita1Q9D1H0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm25881-201ENSMUST00000157783 103 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm18734-201ENSMUST00000172937 808 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Mir3102-201ENSMUST00000175555 104 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm43184-201ENSMUST00000197247 542 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm7848-201ENSMUST00000210739 718 ntBASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rita1Q9D1H0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rita1Q9D1H0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm12196-201ENSMUST00000120954 262 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm12566-201ENSMUST00000121479 359 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm23699-201ENSMUST00000158835 135 ntBASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rita1Q9D1H0 Gm8343-201ENSMUST00000182705 994 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms