Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm11222-201ENSMUST00000119005 738 ntBASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Gm37201-201ENSMUST00000191845 523 ntBASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.56□□□□□ -0.56
Shmt2Q9CZN7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm2546-201ENSMUST00000182630 991 ntBASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm27516-201ENSMUST00000184237 98 ntBASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm6007-201ENSMUST00000208170 823 ntBASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt2Q9CZN7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm13342-201ENSMUST00000121055 207 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm26956-201ENSMUST00000182176 986 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm44364-201ENSMUST00000198368 141 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt2Q9CZN7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms