Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.57□□□□□ -0.24
Smc1aQ9CU62 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gm13665-201ENSMUST00000120830 528 ntBASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gm15547-201ENSMUST00000122152 333 ntBASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smc1aQ9CU62 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Gm14028-201ENSMUST00000117434 479 ntBASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Gm4909-201ENSMUST00000118749 794 ntBASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Gm27046-201ENSMUST00000182160 463 ntBASIC13.55□□□□□ -0.24
Smc1aQ9CU62 AA914427-201ENSMUST00000193194 1166 ntBASIC13.55□□□□□ -0.24
Smc1aQ9CU62 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smc1aQ9CU62 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.54□□□□□ -0.24
Smc1aQ9CU62 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1aQ9CU62 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.54□□□□□ -0.24
Smc1aQ9CU62 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1aQ9CU62 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Smc1aQ9CU62 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1aQ9CU62 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms