Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TpbpbQ9CQC0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm12203-201ENSMUST00000118235 598 ntBASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm12209-201ENSMUST00000120089 596 ntBASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TpbpbQ9CQC0 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm12036-201ENSMUST00000120008 530 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm9083-201ENSMUST00000120423 819 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm8810-201ENSMUST00000172895 754 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm28911-201ENSMUST00000188837 117 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm38092-201ENSMUST00000195600 653 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm44958-201ENSMUST00000203734 736 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TpbpbQ9CQC0 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 213.5 ms