Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Gm24548-201ENSMUST00000158650 108 ntBASIC11.42□□□□□ -0.58
Use1Q9CQ56 Gm6222-202ENSMUST00000182143 629 ntBASIC11.42□□□□□ -0.58
Use1Q9CQ56 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Gm37201-201ENSMUST00000191845 523 ntBASIC11.42□□□□□ -0.58
Use1Q9CQ56 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.42□□□□□ -0.58
Use1Q9CQ56 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.42□□□□□ -0.58
Use1Q9CQ56 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Use1Q9CQ56 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Gm14999-201ENSMUST00000121039 624 ntBASIC11.41□□□□□ -0.58
Use1Q9CQ56 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.41□□□□□ -0.58
Use1Q9CQ56 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Use1Q9CQ56 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Use1Q9CQ56 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms